I use Logos 6 on 2 desktops, one at home and one at the office. Both are Mac. The problem I have is that the clippings documents will not sync from the desktop at the office. They don't show up at documents.logos.com either. I have internet working on this computer and there are no firewall issues. I have attached the log files. HELP!5633.LogosLogs.macuser.20160525-154828.zip
There are fatal errors whilst syncing Clippings, so that explains what you observe. But there are numerous mismatch errors with Notes (apparently not fatal for syncing) so I would recommend you contact Tech Support who can better handle the issues with your databases.
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