If the bibleverse is indented (in the bible resource) then the spaces (between line breaks) is missing when displayed in Passage Guide.
In the bible:
Same thing happen when copying and pasting an indented verse with CBV.
Seems to be your resource as I had no trouble with the ESV (my preferred) in PG, but it had no commas on the end of lines. I chose a text with commas and it came out OK in the Fully Formatted style of CBV.