I have logo's window open the second monitor and editing a note. The tool bar contains several things including a list of fonts and sizes. It works normally as long as the window is not dragged above where the title bar would appear if it was on the second monitor. An easy way to get a window with the top above the title bar is to click the green "maximize" button. Now with it in this position, the font menu works normal with the mouse, but if I hit the hot-key Cmd-Shift-F, the font menu appears on the primary monitor on the left edge. I don't have a logo's window here, so this just looks weird.
I have attached a screenshot. You can see the logo's title bar under the floating font menu. The logo's window is not shown as it is on the other monitor.
The work-around is don't maximize Logo's on the second monitor, but make it slightly smaller, so that it does not enter into the title bar region.
Logos: 5.0a SR-3 (5.0.1.0278)
Lion: 10.7.5