I found a recurrence of the scaling issue still present in SR-4. In the tab below I had clicked on "Enemies on a stake" but it selected "Axes". If I click on the top lines of the tab, they work fine, but the alignment gets progressively worse as I go down the page. I've got scaling set at 90%. If I set it to 100% the problem is worse (i.e. it's a further line out).
