I get different results for a bible search on English Bibles:-
Basic Bible
Term bible:body body
4.0a Laptop 7112/3886 art. 7112/6221 verses ---> no Supplemental, Win XP
4.0a Desktop 7112/3904 art. 7112/6246 verses ---> has Supplemental Index, Win 7 RC
4.0b Laptop 7112/3904 7112/6241 ---> no Supplemental, Win 7 RC
Match All Word forms & Match Case are OFF.
If I had tools like Verse List and could collapse/expand book results (HINT), I might be able to sort this out quite quickly ...However, there appears to be an index issue with different verses/articles on 4.0a SR-3.
Note: I already eliminated one variable as The Complete Word Study Bible:KJV was giving ZERO results in the Bible Search and 174 in Basic - see http://wiki.logos.com/Bug$3a_The_Complete_Word_Study_Bible$3a_KJV_returns_zero_results_in_Bible_Search
Resources are the same version in each installation as they are scanned from the Desktop master installation.