LLS:6.50.12012-01-20T21:31:08ZANF01.logos4
Lost includes: supersript ignored; paragraph boundaries ignored
What Type did you compile this as? Compiling it as a Lectionary retained the formatting and superscript for me. This is because Lectionaries default to using the "bible-text-and-verses-paragraphed" dtext filter. Non-lectionaries default to just "bible-text-and-verses".
Changing the tag to {{dtext ref=ApostolicFathers:1Cl 1-20 | filter=bible-text-and-verses-paragraphed}} gives the result below when compiled as a Reading Cycle. (I think I remember you were wanting these to be a reading cycle?).
What Type did you compile this as?
Reading cycle. I did not have the filter phrase as I'd not needed it previously. That was my problem ... aren't you glad it was my mistake?