I'm not sure if it has got anything to do with EBC specifically, but that's the one that's been crashing on me. (Argh! It crashed on me 3 times in a row and now I've done it 3 times without a crash as I've been testing the process in order to document the steps) Steps to repeat:
1) Open EBC, Volume 12: Hebrews through Revelation
2) Navigate to Revelation
3) Click resource panel and click Print/Export
4) Right-click on top level check box for Revelation and click "Select All"
5) Scroll down to "Section III. Vision of the Seven-Sealed Scroll..." under "Exposition of Revelation"
6) Right-click on Section III. check box and click "Clear All"
7) Crash
EDIT: So after posting, I attempted to continue my work since it hadn't crashed in three attempts. After clearing the section III. checkbox and all of its subsections, I proceeded to clear sections IV, V, and VI...it crashed when clearing section VI. So maybe try checking and clearing multiple large sections to reproduce the crash.
EDIT 2: Also, you may try opening EBC through a PG of Rev 1 instead of opening the book individually...3 of my 4 crashes happened that way. I'm not sure, but I'm wondering if there is a memory overflow or memory leak of some kind causing the problem.
EDIT 3: It just crashed on me when doing something similar in Tom Constable's Expository Notes. It seems to have something to do with selecting enough sections to put the page count over the maximum of 100 pages and then trying to clear large sections to bring the page count back down below 100.