Are there any books that intelligently and thoroughly dialogue with the above either in Logos or anywhere else?
There are several. Just search for relevant key words like "new atheist" or "Dawkins" on the Logos & Vyrso sites and you'll get some good results. Some standouts might include:
While not a direct dialogue with Dawkins and HItchens (although he has debated Hitchens)
a good resource is
https://www.logos.com/product/2844/reasonable-faith-christian-truth-and-apologetics
