I know I have seen this several times in the past, but Logos has never been able to duplicate it.
Here's the problem. When opening a layout, or at times when starting Logos, the entire application frame minimizes automatically and then "un-minimizes" as a tiny window just inside the bottom left of my computer screen.
I've attached the logs.
7522.LogosLogs.bobbybosler.20170906-084625.zip