I don't know what you call it--title bar?--but at the top of the Logos 4 window, Beta 6, that portion goes black after a while. I am on Win 7 and have never noticed such an interface problem before, of L4 (although I just started this round of Beta at 5 . . . so who knows when the problem started.) I notice something similar when I have Adobe reader 9 in full screen. But that's a different issue.
Anyway, this has happened half a dozen times in the last couple days.